dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00666
Location and strand information: 240687 - 241565 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00667
Location and strand information: 241580 - 242407 (+)
Family: 3.A.1.1.46
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00668
Location and strand information: 242412 - 243722 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00669
Location and strand information: 243921 - 245666 (+)
Family: GH43_11|GH43
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.6015
Protein molecular weight: 66375.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00670
Location and strand information: 245948 - 247564 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00671
Location and strand information: 247714 - 249084 (+)
Family: 2.A.66.1.32
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00672
Location and strand information: 249203 - 250042 (-)
Family: Sigma70_r4+Nitro_FeMo-Co
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00673
Location and strand information: 250239 - 250970 (+)
Family: 3.A.1.26.7
Protein type: TC
Protein description: Energy-coupling factor transporter ATP-binding protein EcfA1

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00674
Location and strand information: 250970 - 251893 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000002_2|CGC4
Gene ID: MGYG000000002_00675
Location and strand information: 252012 - 253049 (+)
Family: 3.A.1.106.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000002_00666	Lactose transport system permease protein LacF	TC	240687	241565	+	3.A.1.1.28
MGYG000000002_00667	Inner membrane ABC transporter permease protein YcjP	TC	241580	242407	+	3.A.1.1.46
MGYG000000002_00668	hypothetical protein	null	242412	243722	+	Glyco_hydro_63
MGYG000000002_00669	Beta-xylosidase	CAZyme	243921	245666	+	GH43_11\| GH43
MGYG000000002_00670	hypothetical protein	null	245948	247564	+	DUF5060\| DUF4038\| DUF5605
MGYG000000002_00671	Multidrug export protein MepA	TC	247714	249084	+	2.A.66.1.32
MGYG000000002_00672	hypothetical protein	STP	249203	250042	-	Sigma70_r4\| Nitro_FeMo-Co
MGYG000000002_00673	Energy-coupling factor transporter ATP-binding protein EcfA1	TC	250239	250970	+	3.A.1.26.7
MGYG000000002_00674	hypothetical protein	null	250970	251893	+	SUFBD
MGYG000000002_00675	Vitamin B12 import ATP-binding protein BtuD	TC	252012	253049	+	3.A.1.106.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature